Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920464.1_cds_XP_016469598.1_62132
CDS Infomation

[gene=LOC107791949] [db_xref=GeneID:107791949] [protein=RNA pseudouridine synthase 7-like] [protein_id=XP_016469598.1] [location=join(132859..132949,133051..133094,133242..133319,133646..133746,133957..134044,134643..134721,134853..134935,136487..136552,136679..136735,138203..138334,138931..139169,140207..140309)] [gbkey=CDS]
Sequence

ATGAACATGAAGAGGAAGCGAGAGGATATGGAGATAGTGTGGCAAACTCCCGCCAACCCA
CCCGAACGCCATGACTACATCTTCCGCAATGGAATACGCTATGTCAGACCTTACTACTTC
GAATTCATTTCTCATGTGAAAGCCCGGTGGGCTGGGAAGACAATTGTTGATCTCTTCTCT
GAAGAATTTAAAGGGAGACCTCGTGATTACTATGAATCTGCTGTTAAATCTGGACGTATA
CAAGTTGATGGACAAAAGGTGCATGTTTCATATGTAGTTCAGTCATCACAAAAGATTAGC
CATTTCTTGCACAGGCATGAACCACCAGTGATGTCGTGGGATGTCGAAATACTATGTGAA
GAACCAGATGTGCTGACAGTTTGTAAGCCTGCTTCTGTTCCAGTTCATCCATGTGGACAA
TACCGCAAGAATACAGTTGTTGGTATACTACAAGCTGAGTATGACTTGGCACCTTTGTTT
CCGGTTCATCGCCTAGATCGCTTGGTCTCAGGACTACTTATCTTGGCTAGAAGTGCTTCT
AGGGCTGACCTCTTCAGGCAACAGATAGAATCAGGAATGGTGCAGAAGCAGTATATTGCG
AGAGTGATCGGAGTATTCCCAGATAAGCAGCAAGTTGTGAATGCTAATGTCAATTACAAT
GCTCGAGAAGGAAGAAGCACAGTTGAGGTGGGGGATGGCCAGGGAAATAGTACTGCTTCG
CTGAAGGGAAAGACTGCCTGTACCAAATTTACAAGGATGAGTACCAATGGGAAGCACAGC
ATCGTTCTGTGTGAACCAGTGACTGGCAGGACACATCAGATACGTGTTCATCTGCAATAT
ACAGGACATCCTATAGCCAATGATATGCTCTACCTGTCTGAACTTGTGTCTAATCGTTCT
GCTGAAGGATTGAGTGCGGATAGAGCTGCAGCTAAATCATGTTCTCCTCCAGAGCCCATC
TCTCTTGAAAATGACACTAATGACACGGCAAATGACTCCAATGAAGATTTCAGCATTGAT
CCTGTGTGTACAAATTGTCCAAATCTTGCTCCGAAAGGGTATGAGGGAAATGAAGAGGGT
CTATGGCTGCATTGTGTAAAATATTCCGGACCGGGCTGGATATATGAATGTCCACTTCCA
GATTGGGCATCCCTAAGTTGA

Peptide Sequence

PEP ID

XP_016469598.1
PEP Infomation

PREDICTED: RNA pseudouridine synthase 7-like [Nicotiana tabacum]
Sequence

MNMKRKREDMEIVWQTPANPPERHDYIFRNGIRYVRPYYFEFISHVKARWAGKTIVDLFS
EEFKGRPRDYYESAVKSGRIQVDGQKVHVSYVVQSSQKISHFLHRHEPPVMSWDVEILCE
EPDVLTVCKPASVPVHPCGQYRKNTVVGILQAEYDLAPLFPVHRLDRLVSGLLILARSAS
RADLFRQQIESGMVQKQYIARVIGVFPDKQQVVNANVNYNAREGRSTVEVGDGQGNSTAS
LKGKTACTKFTRMSTNGKHSIVLCEPVTGRTHQIRVHLQYTGHPIANDMLYLSELVSNRS
AEGLSADRAAAKSCSPPEPISLENDTNDTANDSNEDFSIDPVCTNCPNLAPKGYEGNEEG
LWLHCVKYSGPGWIYECPLPDWASLS

Transcript Sequence

Gene sequence data has not been registered.